crm
                 
   melanogaster  TGTA-GG--AATAA-----------AC-----GTCTGAAGG--------TCGAAGC---TTTTGAAGTGCGGCGATAGCGA-TAGGC----------TTTGTGTCG--GGTGATTACG--
       simulans  GGTA-GG--AATAA-----------AC-----GTCTGAAGG--------TCGAAGC---TTTTGAAGTGCGGCGATAGCAA-AAGGC----------TTTGTGTCG--GGTGATTACG--
      sechellia  GGTA-GG--AATAA-----------AC-----GTCTGAAGG--------TCGAAGC---TTTTGAAGTGCGGCGATAGCGA-AAGGC----------TTTGTGTCG--GGTGATTACG--
         yakuba  TGTA-GGATAATAA-----------AC-----GTCTGAAGG--------TCGAAGC---TTTTGGAGTGCGGCGATAGCGA-AAGGC----------TTTGTGTCG--GGTGATTACG--
         erecta  TGTG-GG--AATAA-----------AC-----GTCTGAAGG--------TCGAAGC---TTTTGCAGTGCGGCGATAGCGA-AAGGC-----------TTGTGTCG--GTTGATTACG--
      ananassae  TGTT-GT--AGGAA-------TTTTAG-----GTCTGAAAG--------TTGAAGC-TATTTTGGAGACAATTTGCAGCGA-CAAGCGTTGTTCGTTTTTTTTTTG--GAGAATAATAAA
  pseudoobscura  TGTA-GG--AATAA-----------AC-----GCTTGAAAG--------TTGAAGC---TTTT---GTGTTAGAAGAATAT-AAAAT----------TTCGGATCG--ATCGGATACGGG
     persimilis  TGTA-GG--AATAA-----------AC-----GCTTGAAAG--------TTGAAGC---TTTT---GTGTTAGAAGAATAT-AAAAT----------TTCGGATCG--ATCGGATACGGG
        virilis  GCTA-GG--AATTA-----------ACGT---GTTTGTTAGCTTTTGGTTAGAATA----------------CAAGACTGC-AAAGC------AATATTTATGAAG--GGTGGGGGCTAC
     mojavensis  TATATAG--AATTATACAAGAACGTAGGT---GTTTTATAGAAATAAGATAGGGTAAGCTATT----CGTGGCAAGACTGCAAAAGC------TTTAACTATGAAGAAGCTGGAGCTTGA
      grimshawi  GATAGAG--GAGTA-----------AAATTGGGTTTTCTTG--------TTGAACT----------------TTCGAGTGC-AAAGC---------ATTTAAGAAGCAGCTTGTTTCGAG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  ---------------------------ATAA-TA----C--TTTCGG----CTATCC-------A-----GGGGTGGTTAAA-TAAATAC--------------GCCAACAACTTACAGC
       simulans  ---------------------------ATAA-TA----C--TTTCGG----CTATCC-------A-----GGGGTGGTTAAA-TAAATAC--------------GCCAACAACTTACAGC
      sechellia  -----------------------------AA-TA----C--TTTCGG----CTATCC-------A-----GGGGTGGTTAAA-TAAATAC--------------GCCAACAACTTACAGC
         yakuba  ---------------------------ATAA-TA----C--TTTCGG----CTATCCGGGATCCG-----GGGGTGGTTAAA-TAAATAC--------------GCCAACAACTTACAGC
         erecta  ---------------------------ATAA-TA----C--TTTCGG----CTAGAC-------------AGGGTGGGTAAA-TAAATAC--------------GCCAACAACTTGCACC
      ananassae  AAATAG--------------------CATAA-TACTTTC--TTTCGG----CTATCC-------ATGGGGGGTGTGGTTGAA-TAAATATATATATGATTAAAAGCCAACAACTTACAGC
  pseudoobscura  ATATCC--------------------GCTAGCCG----C--TTTCCGATTTCTATCT-------T-----CGGATGGTTAAA-TAAATAC--------------GCCAACAACTTACATA
     persimilis  ATATCC--------------------GATAGCTG----C--TTTCCGATTTCTATCT-------T-----CGGATGGTTAAA-TAAATAC--------------GCCAACAACTTACATA
        virilis  CCCTAAGAAGGCCTGCAGAAAAGGCGAATAA-TA----C--TTT-------CTGTGT-------------AGC----TTAAA------------------------TAACAACGGAGA-A
     mojavensis  GCCCAACTAAAC--------------GATAA-TA----CTTTTT-------TTATAT-------------AGT----TGAAAATAAATAC----TTGCTAGAGGGCCAACAGCTTTGA-A
      grimshawi  CCGTAAGAAGGAT-------------AATAA-TA----C--TTT-------CTATGT-------------GGG----TTAAA-TAAATAC----TCTCGTCAG---CAAGAACTTAGA-T
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  TCGAAT-TCG------CTAC-GG----ATGGGTC---TTAC-TCTAGGTTAGGATTA----T-------ACGTATATATATATATATTTTTAGAGATATATACAA--AAACA----TATG
       simulans  TCGAAT-TCG------CTAC-GG----ATGGATT---TTAG-TCTAGGTTAGGGTTA----T-------AC--ATATATATATATGTTTTTAGAGATATATACAA--AAACA----TATG
      sechellia  TCAAAT-TCG------CTAC-GG----ATGGATC---TTAG-TCTAGGTTAGGGTTA----T-------AC--ATATATATATATGTTTTTAGAGATATATACAA--AAACA----TATG
         yakuba  TCGAAT-TCG------CTAT-GG----ATGGATC---TTAC-GCTAGATTAGGATTAGGGTT-------AT--ATATATATATATATATTTTTAGATATATACAA--AAACA----TATG
         erecta  TCGAAT-TCG------CTGC-GG----ATGCATC---TTAC-TCTAGGTTAGGGTTAGGGTT-------A----------------------TAGATATATACAA--AAACA----TATG
      ananassae  TCGAAT-TCG------CTAC-GGATACATGTATC---TTACGGATAGCTAGGGGTTA----C-------AT--ACATACATATTTAC-----AAAATACATACAGACAAACACGAGTGTA
  pseudoobscura  TCGAAT-TCG------CTAG-AG----ATA---C---TTAT----------GGTTTA----T-------AT--GCTAATGTATA-------------ATAGATGA--TAATA----TAT-
     persimilis  TCGAAT-TCG------CTAG-AG----ATA---C---TTAT----------GGTTTA----T-------AT--GCTAATGTATA-------------ATAGATGA--TAATA----TAT-
        virilis  GAGAAT-TTG--AAGCTTAT-AG----ATAGCATACGATAC-GATACGATACGATAC----TTTACGAGACA-ATAGATGTATATTACAATTATATCACATAAAC--ACAGT----TTTG
     mojavensis  GAGAAC-TCGATAAGCTTAA-GG----ATACGAT---ATAC-GAT---ATACGATAT----T-------ACG-ATATACG-ATATTACGAAATTACGATATTATT--AGAGT----TATG
      grimshawi  TAGAACGTTG--AAGCTTATCAA----ATACAATACAATAC-GATACGATAAGAT--------------ACA-ATATATATATA----------GGTATATGTAT--AGATA----GTTG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  TACGCTACAATTATATCAC-ATG-AAAACCA-TTTGTA--------CGCC---------------CTCGAATATTGCACGCCCCCGTCA-----------GAAGGAGTAAC---------
       simulans  TACGCTACAATTATATCAC-ATG-AAAACCA-TTTGTA--------CGCC---------------CTCGATTATTGCACGCCCCCGTCA-----------GAAGGAGTAAC---------
      sechellia  TACGCTACAATTATATCAC-ATG-AAAACCA-TTTGTA--------CGCC---------------CTCGAATATTGCACGCCCCCGTCA-----------GAAGGAGTAAC---------
         yakuba  TACGCTACAATTATATCAC-ATG-AAAACCA-TTTGTA--------CGCC---------------CTCGAATATTGCACGCGCCCGTCAGA-----AAGAGGAAGAGTAAC---------
         erecta  TACGCTACAATTATATCAC-ATG-AAAACCA-TTTGTA--------CGCC---------------CCCGAATATTGCACGCCCCCGTCA------------GAAGAGTAAC---------
      ananassae  TGCACTACAATTATATCAC-ATGAAAAACCATTTTGTA--------CGCCTCTGACCTCTGACCTCTCGATTATTGCACGCCCCCGTTTAA---GTACGAGGAGGAGATAC---------
  pseudoobscura  -----TACAATTATATCAC-ATG-AGAACCT-TTTGTACCCTCCTCCGCCCCCCTCCCCCTGCCGTTTGTATTGCACACACCCCCGCTC------------------TGTT---------
     persimilis  -----TACAATTATATCAC-ATG-AGAACCT-TTTGTACCCTCCTCCGCC-----CCCCCTGCCGTTTGTATTGCACACACCCCCGCTC------------------TGTT---------
        virilis  TACGCCGCACAAAT-TCACAATC-CACCAGC---------------CATC------AGCCAGGAGCGAGGGGATGGCGCCTATTAATAT----TGCACACTGAGGACCAGC---------
     mojavensis  TATATTACAATTATATCAC-ATG-AAACAGT-TTTGTA--------CGCC------GCACAAATTCACGAAGATTCCAGCAGCCAGCG------AAAGGCTGGAGGATGGCGCCTTTTCT
      grimshawi  TATATTACAATTATATCAC-ATG--AACATT-TTTGTA--------CATC------GCACAAAACTTTACAAAATCCATTTCCTTACATATTGCACACACTTGGAACCAGC---------
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  ------------------------------CCCTT----------------ATGGGTAACCAT---------------------------------------------TGGTCAG-----
       simulans  ------------------------------CCCTT----------------ATGGGTAACCAG---------------------------------------------TGGTCAG-----
      sechellia  ------------------------------CCCTT----------------ATGGGTAACCAG---------------------------------------------TGGTCAG-----
         yakuba  ------------------------------CCCTTGTGTGTGTGGGTAACCACTAGTGACTGA---------------------------------------------TGGTCAT-----
         erecta  ------------------------------CCCT-----------------ATGGATGAGCGG---------------------------------------------TGGTCAC-----
      ananassae  ------------------------------TTTTT----------------ATT--CTCCCTA---------------------------------------------TAATAAGATTAA
  pseudoobscura  ------------------------------CGCCG----------------GCCGACCGATTG---------------------------------------------CAGCCCC-----
     persimilis  ------------------------------CGCCG----------------GCCGACCGATTG---------------------------------------------CAGCCCC-----
        virilis  ------------------------------CGGGT----------------GTAGGGAGCAGGAAGCAGGACGCGGAGAGCAGG---------GAGC------------GGTAGC-----
     mojavensis  TCTATATATTGCACACTTAGGACCAGCCGGGGAGT----------------GTGGGGAGCAGG-----GGAGCTGGGGAGCAGGCGATCAGACGAGCTGGGGGGAAGCTGTTTGC-----
      grimshawi  ------------------------------CGGGA----------------GTGGGGG--AGT-----TGATGTGGAGATGAGG---------------GGGGAGATGTGGAGCC-----
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  --CGCTTAGGGGATCTGCCCGTTCATGCGCATCTCGAGCTCCTCCTCCTCCTTGGTCAGCGGCACGGTGGTGTGGTTGTACAATCCCTGGGCCATCAGCTGCAGTGCCAGCGGATTTTTG
       simulans  --CGCTTAGGGGATCTGCCCGTTCATGCGCATCTCCAGCTCCTCCTCCTCCTTGGTCAGCGGCACGGTGGTGTGGTTGTACAATCCCTGGGCCATCAGCTGCAGGGCCAGCGGATTCTTG
      sechellia  --CGCTTAGGGGATCTGCCCGTTCATGCGCATCTCGAGCTCCTCCTCCTCCTTGGTCAGCGGCACGGTGGTGTGGTTGTACAATCCCTGGGCCATCAGCTGCAGGGCCAGCGGATTCTTG
         yakuba  --CGCTTAGGGGATCTGCCCGTTCATGCGCATCTCGAGCTCCTCCTCCTCCTTGGTCAGCGGCACGGTGGTGTGGTTGTACAATCCCTGGGCCATCAGCTGCAGGGCCAGCGGATTTTTG
         erecta  --CACTTAGGGTATCTGGCCGTTCATGCGCATCTCGAGCTCCTCCTCCTCCTTGGTCAGCGGCACGGTGGTGTGGTTGTACAATCCCTGGGCCATCAGCTGCAGGGCCAGCGGATTCTTG
      ananassae  TTTCTTTAGGGGATCTGGCCGTTCATGCGCATCTCGAGCTCCTCCTCCTCTTTGGTCAGCGGAACGGTGGTGTGATTGTAGAGTCCTTGGGCCATCAGCTGGAGGGCCAATGGATTCTTG
  pseudoobscura  --TTTTTAGGGGATCTGGCCGTTCATGCGCATCTCGAGCTCCTCCTCCTCTTTGGTCAGTGGCACCGTCGTGTGGTTGTACAGTCCCTGGGCCATCAGCTGGAGGGCCAGGGGGTTCTTG
     persimilis  --TTTTTAGGGGATCTGGCCGTTCATGCGCATCTCGAGCTCCTCCTCCTCTTTGGTCAGTGGCACCGTCGTGTGGTTGTACAGTCCCTGGGCCATCAGCTGGAGGGCCAGGGGGTTCTTG
        virilis  --CATTTACGGAATCTGCCCGTTCATGCGCATCTCTAGCTCCTCCTCCTCTTTGGTCAGCGGCACTGTCGTATGGTTGTAGAGACCCTGGGCCATCAGCTGGAGGGCCAGCGGATTCTTG
     mojavensis  --CATTTACGGTATCTGGCCGTTCATGCGCATCTCAAGCTCCTCCTCCTCTTTGGTCAGCGGCACCGTCGTATGATTGTACAGACCCTGGGCCATCAGCTGCAGGGCCAGAGGATTCTTC
      grimshawi  --TTCTTACGGTATCTGGCCGTTCATGCGCATCTCGAGCTCCTCCTCCTCTTTGGTCAGCGGCACCGTCGTATGATTGTACAGACCCTGGGCCATCAGTTGGAGGGCGAGGGGATTTTTC
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  GAGCCCGTCGACTTCTTGATCTTGGCCCGCTTGTTCTGGAACCAGATCTTGATCTGCGCCTCGTTCAGGCCCAACTCGCTGCTCAGCTGCTGGCGTCTCCGCTCGGTCAGATAGCGATTC
       simulans  GAGCCCGTCGACTTCTTGATCTTGGCCCGCTTGTTCTGGAACCAGATCTTGATCTGCGCCTCGTTCAGGCCCAACTCGCTGCTCAGCTGCTGGCGTCTCCGCTCGGTCAGATAGCGATTC
      sechellia  GAGCCTGTCGACTTCTTGATCTTGGCCCGCTTGTTCTGGAACCAGATCTTGATCTGCGCCTCGTTCAGGCCCAACTCGCTGCTCAGCTGCTGGCGTCTCCGCTCGGTCAGATAGCGATTC
         yakuba  GAGCCCGTCGACTTCTTGATCTTGGCCCGCTTGTTCTGGAACCAGATCTTGATCTGGGCCTCGTTCAGGCCCAACTCGCTGCTCAGCTGCTGGCGTCTCCGCTCGGTCAGATAGCGATTC
         erecta  GAGCCCGTCGACTTCTTGATCTTGGCCCGCTTGTTCTGGAACCAGATCTTGATCTGCGCCTCGTTCAGGCCCAACTCGCTGCTCAGCTGCTGGCGTCTCCGCTCGGTCAGATAGCGATTC
      ananassae  GAGCCGGTGGACTTCTTGATCTTGGCCCGCTTATTCTGGAACCAGATCTTGATCTGGGCCTCATTCAGGCCCAATTCGGAGCTCAGTTGCTGGCGTCGGCGCTCGGTCAGATAGCGATTC
  pseudoobscura  GAGCCGTTGGACTTTTTGATCTTGGCCCGCTTGTTCTGGAACCAGATCTTGATCTGGGCCTCGTTCAGGCCCAGCTCTCCGCTCAGCTGCTGGCGTCGCCGTTCGGTCAGATAGCGATTC
     persimilis  GAGCCGTTGGACTTCTTGATCTTGGCCCGCTTGTTCTGGAACCAGATCTTGATCTGGGCCTCGTTCAGGCCCAGCTCTCCGCTCAGCTGCTGGCGTCGCCGTTCGGTCAGATAGCGATTC
        virilis  GAGCCCGTCGACTTCTTGATTTTGGCGCGCTTGTTCTGGAACCAGATCTTGATCTGTGCCTCGTTCAGGCCCAGCTCGGAGCTCAGCTGCTGACGGCGTCTTTCGGTGAGGTAGCGATTC
     mojavensis  GAGCCCGTCGACTTCTTGATTTTGGCGCGCTTGTTCTGGAACCAGATCTTGATCTGTGCCTCGTTCAGGCCCAGCTCGGAGCTCAGCTGCTGGCGTCGTCGTTCGGTGAGGTAGCGATTC
      grimshawi  GATCCAGTCGACTTCTTGATTTTGGCTCGCTTATTCTGGAACCAGATCTTGATCTGTGCCTCATTCAAACCCAGCTCTCCGCTCAGCTGCTGGCGGCGTCTTTCGGTGAGGTAGCGATTC
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  TCGTTGAACTCCCGCTGTAAGTGGAAGA---------------------AATG-GA--ATGC------------TGGATGAGTTTCGGA--TGGCA---------AGGATATCCATG---
       simulans  TCGTTGAACTCCCGCTGTAAGTGGAAGA---------------------AATG-GA--ATGC------------TGGATGAGTTTCGGA--TGGCA---------AGGATATCCATG---
      sechellia  TCGTTGAACTCCCGCTGTAAGTGGAAGA---------------------AATG-GA--ATGC------------TGGATGAGTTTCGGA--TGGCA---------AGGATATCCATG---
         yakuba  TCGTTGAACTCCCGCTGTAAGTGGAAGA---------------------GATG-GAATATGC------------TGGATGAGTTTCGGA--TGGCA---------AGGATATCCATG---
         erecta  TCGTTGAACTCCCGCTGCAAGTGGAAGA---------------------AATG-GA--TTGC------------TGGATGAGTTTCGGA--TGGCA---------CGGTTATCCATG---
      ananassae  TCGTTGAACTCCCGCTGTAAATAGAAGA--------------------GGATG-GA--ATTC------------CGGATGAGTTTCAGA--TGACA--------TTAGAGAGCCCTA---
  pseudoobscura  TCGTTGAACTCCCGCTGCAAGTAGAAAGATC----------------AGAGAG-GA--GTCT------------GGGATGAGTACAGAG--GCACA---------GAGATACGGATG---
     persimilis  TCGTTGAACTCCCGCTGCAAGTAGAAAGATC----------------AGAGAG-GA--GTCT------------GGGATGAGTACAGAG--GCACA---------GAGATACGGATG---
        virilis  TCATTGAATTCGCGCTGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGCAA--ATGG-----TGAGAATCGGCTGCGCAATAAA--AGGTAACTAGGGTCGGGTCAGCTCTGAGC
     mojavensis  TCATTGAATTCGCGCTGTTAGAGAGAGCGGAAGAGAGAAAGAGAGAGAGAGAG-AG--ATGA------GCAAATTGTGTGCGCAATAAA--AGGCAACTAGGGTCGGGTCAGGTCTG---
      grimshawi  TCATTGAATTCGCGCTGTAAGAGACAAACAGAAAGAGAAAGAGAGAGAGAGAG-AG--GTGAGATTGTGTGGATTGGATGCGCAATAAAAGAGGCAACTAGGGTCGGGTCAGGTCTG---
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  ---------------------------TTGTA-TAGT--------------------CA-GGTAGGGAAAATCAATTATTTGCGGTTTC----------GGC------------------
       simulans  ---------------------------TTGTA-TAGT--------------------CA-GGTAGGGAAAATCAATTATTTGCGGTTTC----------GGC------------------
      sechellia  ---------------------------TTGTA-TAGT--------------------CA-GGTAGGGAAAATCAATTATTTGCGGTTTC----------GGC------------------
         yakuba  -------------TTGTATA-------TAGTG-TAGT-----------GTAGG----TA-GGTAGGGAAAATCAATTATTTGCGGTTTT---------GGGC------------------
         erecta  ---------------------------TGGTG-CAGT------------CAGT----CA-GGTAGGGAAAATCAATTATTTGCGGTTTC---------GGGC------------------
      ananassae  ---------------------------AACCC-CAGG--------------------TAGGGTAAGGAAAATCAATTATTTGCGGTTGC--TT-----GGAC------------------
  pseudoobscura  ---------------------------GGATC-TACTATGGGAGGCTGGTAGG----TA-GGTAAGGCAAATCAATTATTTGCGGTTTGAGTTGAAAGAGGCACCCC-GAAGACAGACTG
     persimilis  ---------------------------GGATC-TACTATGGGAGGCTGGTAGG----TA-GGTAAGGCAAATCAATTATTTGCGGTTTGAGTTGAAAGAGGCACCCC-GAAGACAGACTG
        virilis  CAAAGAGAACGAGTGCGATAATGTTTTCAGTG-TAGG------------TAG-----AG-GCTGAGGCAAATCAATTATTTGCGGTTTA-GTTGAAAGACG-------------------
     mojavensis  ---------------------------CTGTGCTAGG------------TAG-----AA-TCTGAGGCAAATCAATTATTTGCGGTTTA-GTTGAAAGACA-------------------
      grimshawi  --CAGAAAAACAGTACAACG-------TTATG-AAGA------------TAGGCACAGG-GCTGAGGCAAATCAATTATTTGCGGTTTA-GTTGAAAGACGACGACTGTGTGGCACTGTG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  ----------------------------------CGAGCGTGGCTGATTGGTTAAGTACGG-------ACGGG----------------------ACACC--------------------
       simulans  ----------------------------------CGAGCGTGGCTAATTGGTTAAGTACGG-------ACGGG----------------------ATGT---------------------
      sechellia  ----------------------------------CGAGCGTGGCTAATTGGTTAAGTACGG-------ACGGG----------------------ATGT---------------------
         yakuba  ----------------------------------CGAGCGTGGCTAATTGGTTAAGTACGGAC-ACGGACGGG----------------------ATGC---------------------
         erecta  ----------------------------------CGAGCGTGGCCAATTGGTTAAGTACGGC------AGGGG----------------------ATGC---------------------
      ananassae  ----------------------------------TGAGCGTGTCAAATTGGTTAAGTACGGAG-----ACAGG----------------------ATGC---------------------
  pseudoobscura  CCAG------TAGATGGAAGTCCG-GGTGAGATATGAGCGTGTCTAATTGGTTAAGTACGGACCGGGGACAGGGGACCGGGGACCGAGGCAGGACATGC---------------------
     persimilis  CCAG------TAGATGGAAGTCCG-GGTGAGATATGAGCGTGTCTAATTGGTTAAGTACGGACCGGGGACAGGGGACCGGGGACCGGGGCAGGACATGC---------------------
        virilis  ---------------GGTAGTGTG-AGTGAAATATGAGCATGTCCAATTGGCTTAGT-----------CGAGG----------------------ACACT--------------------
     mojavensis  ---------------TGTAGTGTG-AGTGAAATATGAGCATGTCTAATTGGCTTAGT-----------TGAGG----------------------ACACTG-----GCATGGCCGTGCCG
      grimshawi  CGGCACTGTGTGGCAGGCAGTGTGTTGTGAAATATGAGCATGTCTAATTGGTTTAGT-----------CGAGG----------------------ACACTGTGGACGACTGGACGACTCG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  -----------ACATTGCCAGGATGCA----------TTAGCAGCGGGCG---------------------------------GTGTCAATATTTTGG-TGCAAATATGACACAACAAGC
       simulans  ------------GGTGGCCAGGATGCA----------TTAGCAGCGGGCG---------------------------------GTGTCAATATTTTGG-TGCAAATATGACACAACAAGC
      sechellia  ------------GGTGGCCAGGATGCA----------TTAGCAGCGGGCG---------------------------------GTGTCAATATTTTGG-TGCAAATATGACACAACAAGC
         yakuba  ------------GGTGGCCAGGATGCA----------TTAGCAGCGGGCG---------------------------------GTGTCAATATTTGGG-TGCAAATATGACACAACAAGC
         erecta  ------------GGTGGCCAGGATGCA----------TTAGCAGCGGGCG---------------------------------GTGTCAATATTTTGG-TGCAAATATGACACAACAAGC
      ananassae  ------------AGTCGGTAGGA-GCAGGATATGCTCCTAACAGCAGGCAGTCAGGTCAGTCCCGGCACAAG-----TAATGTGTGTAAATATTTTGG-TGAAAATATGACACAACAA--
  pseudoobscura  ------------GTTTGCCAGGATGCA----------ATCGCCGCGGGGG---------------TCTCGGA-----AAATATGTGTAAATATTTTGG-TGCAAATATGACACAACAAGG
     persimilis  ------------GTTTGCCAGGATGCA----------ATCGCCGCGGGGG---------------TCTCGGA-----AAATATGTGTAAATATTTTGG-TGCAAATATGACACAACAAGG
        virilis  ----------------GCCAGGATGCA-----------GCCCAGCGGGCG---------------GCCACAC-----TAAAGTGTGTAAATATTTTGGCTGTAAATATGACACAACAC--
     mojavensis  TCGCCGTCGCC--GTCGCCAGGATGCA-----------GCGCAGCGGGCG---------------GCGCAGCGTGTGTAAAGTGTGTAAATATTTTGGTTGTAAATATGACACAACA---
      grimshawi  GTGCGGTTGCCAGGTCGCCAGGATGCA----------CGCACAGCGGGAC---------------ACCCACC----GTAAAGTGTGTAAATATTTTGGCTATAAATATGACACAACAA--
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  G---TAGGGCAATTGGATATGGATA-------------------TGGAT--GGATATTG-----GTATA--------ACCATATAACCATATATGGAAAAAAGAACTGAATCTCACCTTA
       simulans  G---TAAGGCAATTGGATATGGATA-------------------TGGAT--GGATATTG-----GTATAGGGTATACACCA-A-AACCATATATGGAAAAAGGAACTGAATCTCACCTTG
      sechellia  G---TAGGGCAATTGGATATGGATA-------------------TGGAT--GGATATTG-----GTATAGTGTATACACCATA-GCCCATATATGGAAAAAGGAACTGAATCTCACCTTG
         yakuba  G---TAGGGCAATTGGATATGGATA-------------------TGGATAGGGATA-TG-----GTA----------ACCATA----TATGGATGGAAAATGGAACAGAATCTCACCTTG
         erecta  G---TA-GGCAATTGGATAGGGATT-------------------CGGAT-------------------------------------------ATGGTGTATAGAACAGATTCTCACCTTG
      ananassae  -------------TGGAT-----TT-------------------TGGAA--GGATATTG-----G---------------------------ATG----------------CTTACCTTG
  pseudoobscura  GATCTATGGC--TTCTACATGGGTC-------------------TGTGT--GAGTGCTT-----GTGTGTG---------------------ATG----------------CTTACCTTG
     persimilis  GATCTATGGC--TTCCACATGGGTC-------------------TGTGT--GAGTGCTT-----GTGTGTG---------------------ATG----------------CTTACCTTG
        virilis  -TGCTGGGATGCCTGTGTGTGTGTGTG-----------------TGTGT--GGGTATCT-----GGGAC----------------------------------------TGCTTACCTTG
     mojavensis  -TGGAGGGATAACTGAGATGGAGTGGGATGGAGTGGGATAGCCTGGTAT--GGGCTGTTATGGAGAGGA----------------------------------------TGCTTACCTTT
      grimshawi  ----------------------------------------------------------------------------------------------------------TGATGCTTACCTTG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  AGGCGGGCCAACTGCTCGCTGGAGAACGCGGTGCGTGGACGCTTCTCGTCGTTGGTCTTGTCCTTTGGCTGTTTGGGGCGGCGGTAGCGGGGTCCTGGAA-----TAAACAA-AAACAC-
       simulans  AGGCGGGCCAACTGCTCGCTGGAGAAGGCGGTGCGTGGACGCTTCTCGTCGTTGGTCTTGTCCTTTGGCTGTTTGGGGCGGCGGTAGCGGGGTCCTGTAA-----TAAACAA-AAACAC-
      sechellia  AGGCGGGCCAACTGCTCGCTGGAGAAGGCGGTGCGTGGACGCTTCTCGTCGTTGGTCTTGTCCTTTGGCTGTTTGGGGCGGCGGTAGCGGGGTCCTGTAA-----TAAACAA-AAACAC-
         yakuba  AGGCGGGCCAACTGCTCGCTGGAGAAGGCGGTGCGTGGACGCTTCTCGTCGTTGGTCTTGTCCTTTGGCTGTTTGGGGCGGCGGTAGCGGGGTCCTAAAA-----TGAACAGAAAACAC-
         erecta  AGGCGGGCCAACTGCTCGCTGGAGAAGGCGGTGCGTGGACGCTTCTCGTCGTTGGTCTTGTCCTTTGGCTGTTTGGGGCGGCGGTAGCGGGGTCCTGGAA-----TACACGG--AACAC-
      ananassae  AGGCGGGCCAATTGTTCGCTGGAGAAGGCGGTGCGTGGTCGCTTCTCGTCGTTGGTCTTGTCCTTTGGCTGTTTGGGGCGGCGGTAGCGAGGTCCTGCAA-----TGCGAAA--GAGAG-
  pseudoobscura  AGGCGGGCCAATTGCTCGCTGGAGAAGGCCGTGCGTGGCCGCTTCTCATCATTGGTCTTGTCCTTTGGCTGTTTGGGGCGGCGGTAGCGGGGTCCTTTAAG----TAAAAGA-GAAAAC-
     persimilis  AGGCGGGCCAATTGCTCGCTGGAGAAGGCCGTGCGAGGCCGCTTCTCGTCATTGGTCTTGTCCTTTGGCTGTTTGGGGCGGCGGTAGCGGGGTCCTTTAAG----TAAAAGA-GAAAAC-
        virilis  AGGCGTGCCAATTGCTCGCTGGAGAAGGCGGTGCGTGGACGCTTCTCGTCATTGGTCTTGTCCTTTGGTTGCTTGGGGCGACGATAGCGGGGTCCTGCAA----------AG--AATAA-
     mojavensis  AGGCGTGCCAATTGCTCGCTGGAGAAAGCAGTGCGTGGTCGCTTCTCATCATTGGTCTTGTCCTTTGGTTGCTTGGGGCGACGGTAGCGGGGTCCTGCAAT--GCCATACAA--AAGAG-
      grimshawi  AGGCGTGCCAACTGTTCGCTGGAGAAGGCGGTGCGTGGACGCTTCTCGTCATTGGTCTTGTCCTTTGGTTGCTTGGGGCGACGATAGCGGGGTCCTGCAAGAAGCCAAAAAA--AAAAGA
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  -------------------GAG-AAATAC----GTTAG-----TTC-------TATTTGCAT-A------AATGCGC------------------------CACATACTATTAATAATAT
       simulans  -------------------GAG-AAATAC----GTTAG-----TTC-------TATTTGCAT-A------AATGCGC------------------------CACATACTATTAATAATAT
      sechellia  -------------------GAG-AAATAC----GTTAG-----TTC-------TATTTGCAT-A------AATGCGC------------------------CACATACTATTAATAATAT
         yakuba  -------------------GAG-AAATAC----GTTAG-----TTC-------TATTTGCAT-A------AATGCGG------------------------CACATACTATTAATAATAT
         erecta  -------------------GAG-AAATAC----GTTAG-----TTC-------TATTTGCAT-A------AATGCGG------------------------CACACACTATTAATAATAT
      ananassae  -------------------AAA-AAATATAAAAGTTAG-----TCT-TGGCGGTATTTGCATAA------AATGTTC------------------------CACATACTATTAATAATAT
  pseudoobscura  -------------------GGA-G---------TTTAG-----TTTTTGGACGCATTTGCAT-A------AATGTCT------------------------CACATGTGATTAATAATAT
     persimilis  -------------------GGA-G---------TTTAG-----TTTTTGGCCGCATTTGCAT-A------AATGTCT------------------------CACATGTGATTAATAATAT
        virilis  -------------------TAGAAAA-------GTTAG-----TCG---AGC------GAAA-G--AAGTTATGGCT-------------------------GCATATAATTAATGTTAT
     mojavensis  -------------------TAG-AAA-------GTTAG-----TCG---AGCGTGCTTGAAA-GCAAAAGAATGTCTCCTCCATCCCCCTCACCCAAAACTCGCATATAATTAATGATAT
      grimshawi  AAAAAACGAAAAAAGCAAATAG-AAA-------GTTAGCATATTTG---AACATAATCCCAC-A--TACTTATGTCT-------------------------GCATATAATTAATGATAT
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  TAATGATTCAATTAGCATATG---------------------------TCTGGG------CGGAATTCCTC------------------------GGCCGGAGCTGGAGCTCCC------
       simulans  TAATGATTCAATTAGCATATG---------------------------TCTGGG------CGGAATTCCTC------------------------GGCCGGAGCTGGAGCTCCC------
      sechellia  TAATGATTCAATTAGCATATG---------------------------TCTGGG------CGGAATTCCTC------------------------GGCCGGAGCTGGAGCTCCC------
         yakuba  TAATGATTCAATTAGCATATG---------------------------TCTGCG------CGGAATTCCTCGGCCGGTGCTGGAACTGGAGCTGTAGCTGTAGCTGGAGCTCCC------
         erecta  TAATGATTCAATTAGCATATG---------------------------TCTGGG------CCAAATTCCTC------TGCCGGAGCTGGAGCCGGAGCTGGAGCTGGTGCTCCC------
      ananassae  TAATGATTTAATTAGCATATG---------------------------TCTGGGGCGGAATGGCATTCTTT-------------------------------------TCTTTT------
  pseudoobscura  TAATGATTTAATTAGCATATG---------------------------CCT---------CTAGACCCCTA-------------------------GTCGGAGCTCTTTCTTTCGCTATT
     persimilis  TAATGATTTAATTAGCATATG---------------------------CCT---------CTAGACCCCTA-------------------------GTCGGAGCTCTTTCTTTCGCTATT
        virilis  TAATGGTTTAATTAGCATATA---------------------------------------CTAAA------------------------------------AACTA----ATAA------
     mojavensis  TAATGGTTTAATTAGCATATA------------------GTATGTATGTTTGCC------CCAGA------------------------------------CGCTGCTTTCTCG------
      grimshawi  TAATGGTTTAATTAGCATATATATACTCGTGGTATGTGTGTATGTGTGTGTGTG------TTGAAGTTGCC-----------------------------TCGTTGCTTTCTCA------
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  --------TTTCGCGTGCTGGCGGGGAA--------------------GTGTTCAATTTGTCAGCTGTCAGCGCAAGAGAAGAGTAGAACTCCGGCGAG-TTAAC---------------
       simulans  --------TTTCGCGTGCTGGCGGGGAA--------------------GTGTTCAATTTGTCAGCTGTCAGCGGAAGAGAAGAGTAGAACTCCGGCGAG-CTAAC---------------
      sechellia  --------TTTCGCGTGCTGGCGGGGAA--------------------GTGTTCAATTTGTCAGCTGTCAGCGGAGGAGAAGAGTAGAACTCCGGCGAG-CTAAC---------------
         yakuba  --------TTTCGCGTGCTGGCGGGGAA--------------------GTGTTCAATTTGTCAGCTGTCAGCGGAAGAGCGGAGAAGAACTCCGCCAAG-CTAAC---------------
         erecta  --------TTTTGCGTGCTGGCGGGGAA--------------------GTGTTCAATTTGTCAGCTGTCAGCGGAGGC----AGAGGAACTCCGGCGAG-CTAAC---------------
      ananassae  --------CTTTGCGTGCTGGCCGGGAA--------------------GTGTTCAATTTGTCAGCTGTCAGCGTTGGAAAGAAGT-----CCCGACCGC-CTAAC---------------
  pseudoobscura  TCCCAGTTTCTTGCGTGATGGCGGGGAA--------------------GTGTTCAATTTGTCAGCTGTCAGAGG------------GCTCCCGGGCGGGTCTAAC---------------
     persimilis  TCCCAGTTTCTTGCGTGATGGCGGGGAA--------------------GTGTTCAATTTGTCAGCTGTCAGAGG------------GCTCCCGGGCGGGTCTAAC---------------
        virilis  --------AAAAAACTTGTGGCATGCAACGGCCGA--------GCCGCGTGTTCAATTTGTCAGCTGTC----------------AGAGCTGCGTCTAG-CGAACCAAGCGGAAG-----
     mojavensis  --------CATTTACTTGTGGCATGCAACGAGCGAGCGGCTCTGCCGCGTGCTCAATTTGTCAGCTGTCAGAG----------CAAAAGTCAAGTCAAG-CGAAAATGACTTAATAATCC
      grimshawi  --------ACGAACGTTGTGGCATGCAA-------------------CGTGTTCAATTTGTCAGCTGTCA--------------------------------------------------
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  -GAACC-------------------------CAAAGGTCTAC--------------------------------------GGCATATTTTAGG--CAAATGAT------TTGCCAGC---
       simulans  -GAACC-------------------------CAAAGGTCTAC--------------------------------------GGCATATTTTAGG--CAAATGAT------TTGCCAGC---
      sechellia  -GAACC-------------------------CAAAGGTCTAC--------------------------------------GGCATATTTTAGG--CAAATGAT------TTGCCAGC---
         yakuba  -GAACCCGAA-CCCGACTCCGTACCGGAACGCAAAGGTCTAC--------------------------------------GGCATATTTTAGG--CAAATGAT------TTGCCAGC---
         erecta  -GAACC-------------------------CAAAGGTTTAC--------------------------------------GGCATATTTTAGG--CAAATGGT------TTGCCAGCG-G
      ananassae  -GAACG-------------------------CCAA---------------------------------------------GGCATATTTTAAG--CAAATGAT------TT-CCATT---
  pseudoobscura  -GAACTCGGGTCTCGGCCTCGAGTC------CGGGAATGTGC------------------------CAGGCAGGCAGGCAGGCATATTTTAGG--CAAA---------------------
     persimilis  -GAGCTCGGGTCTCGGCCTCGAGTC------CGGGAATGTGCCAGGCAGACAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCATATTTTAGG--CAAA---------------------
        virilis  -GAACG---------------------------------------------------------------------------GCCCGTTCCGGG--CAGGGAACGAGGCACGACATTCGCC
     mojavensis  CAAACT---------------------------------------------------------------------------GCTTAATTCATATTTAGCTAAT------TGACAAACG--
      grimshawi  ------------------------------------------------------------------------------------------------------------------------
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  TAGCC-AACTC---TCTAATTA---------GCGA----CTAAGTCCAAGTCACCGG--CTAATTGG------CAACGCGGCACCGCAGCAATC--------------------------
       simulans  TAGCC-AACTC---TCTAATTA---------GCGA----CTAAGTCCAAGTCACCGG--CTAATTGG------CAACGCGGGACCGCGGCAATC--------------------------
      sechellia  TAGCC-AACTC---TCTAATTA---------GCGA----CTAAGTCCAAGTCACCGG--CTAATTGG------CAACGCGGGACCGCGGCAATC--------------------------
         yakuba  TAGCC-AACTC---TCTAATTA---------GCGA----CTAAGTCCAAGTCAGCGG--CTAATTGG------CAACTTGGTACGGCAGCGATG--------------------------
         erecta  TCGCCAAACTC---TCTAATTA---------GCGA----CCAAGTCCAAGTCAGCGG--CTAATTGG------CAACTCGGAATCGCAGCGGTA--------------------------
      ananassae  TCTCCCCACCC---CCC-----------------A----CTAGTTCCTAGGCACT----CTAATTAG------CAAGTTAGTCTCTAGAGACTC------------------TAAGTCGG
  pseudoobscura  TTTTC-AGCCG---TCTAATTA---------GTGGTGTTCTCGGTTC---TCAAT----CTAATTGG------CAGTGCGAACCATCCACGATAGATAGATAGATGGATAGATAGATAGG
     persimilis  TTTTC-AGCCG---TCTAATTA---------GTGGTGTTCTCGGTTC---TCAAT----CTAATTGG------CAGTGCGAACCATCCACGATAGATGGATAGATAGATAGATAGATAGG
        virilis  ATTTC-AGCCCGACTTTAATTAATATGATGAGCGC----CAAAGTTCAGAGGGCCAGTTCAAAGCAGACAGACAAACCCGAGAATGACTTAATA--------------------------
     mojavensis  ATTTC-TACTC----TTAGCTAAT--------TGC----C--GGCTCAGGG-------TCTAAGCCG--------AGCTGAGGTTGTTTTGCAA--------------------------
      grimshawi  ------------------------------------------------------------------------------------------------------------------------
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  ------------CGTAG-----------TGCTTATTAGATTTCCACACATTGTAAATTATAATT--TAATTGACC--GCCAGTAAGT-GGAGATCGTTT-GATTAA-----TTCCTA---
       simulans  ------------CGAAG-----------TGCTTATTAGATTTCCACACATTGTAAATTATAATT--TAATTGACC--GCCAGTAAGT-GGAGATCGTTT-GATTAA-----TTCCTA---
      sechellia  ------------CGAAG-----------TGCTTATTAGATTTCCACACATTGTAAATTATAATT--TAATTGACC--GCCAGTAAGT-GGAGATCGTTT-GATTAA-----TTCCTA---
         yakuba  ------------CGAAG-----------TGCTTATTAGATTTCCACACATTGTAAATTATAATT--TAATTGAGCGGGGCAGTAAGT-GGGGATCGCTT-GATTAA-----TTCCTA---
         erecta  ------------CGAAG-----------TGCCTATTAGATTTCCACACACTGTAAATTATAATT--TAATTGAGC--GGCAGTAAGT-GGAGATCGGTT-GATTAA-----TTCCTG---
      ananassae  --------CTGGCAAAG-----------TGCTTATTAGATTTCCACACATTGTTAATTATAATTGGTAAGTGGTA--AGTGGTAAGTGGGAGATCACTTCGATTAAGAGAGTCTATAT-A
  pseudoobscura  GAGAGTGACTGTCAAAG-----------TGCTTATTAGATTTCCACACATTGTAAATTATAATT--AAATTGACT--CGAAGCGG---GATGATGCTTT-GATTAA-----TTCCCATCG
     persimilis  GAGAGTGACTGTCAAAG-----------TGCTTATTAGATTTCCACACATTGTAAATTATAATT--AAATTGACT--CGAAGCGG---GATGATGCTTT-GATTAA-----TTCCCATCG
        virilis  ---------ATCCCGGC-----------TGCTTAGTA----TCGACACATTGTAAATTATAATT--TAATTGCTC--GATTGC-----TTAGATGATTT-GATTAA-----TCTCGC---
     mojavensis  ------------CCGGCGATTTGAATTTTGTTTAGCT----TCGACACATTGTAAATTATAATT--TAATTGCCC--GATTGC-----TTAGATAATTT-GATTAA-----TCTCGC---
      grimshawi  -----------------------------------------TTAACACATTGTAAATTATAATT--TAATTGCTG--GATTGC-----TTAGATAATTT-GTTTAA-----TCTCGC---
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  -GCCGCGGA------------------------GTGG--GGCCATCAACGCCTCGCTTATGGG----------------CTGCC-AT---CGATTGCATCGACACCAAATTAAAAAACCA
       simulans  -GCCGCGGA------------------------GTGG--GGCCATCAACGCCTCGCTTATGGG----------------CTGCC-AT---CGATTGCATCGACACCAAATTAAAAAACCA
      sechellia  -GCCGCGGA------------------------GTGG--GGCCATCAACGCCTCGCTTATGGG----------------CTGCC-AT---CGATTGCATCGACACCAAATTAAAAAACCA
         yakuba  -GCCGCGGA------------------------GTGG--GGCCATCAACGCCTCGCTTATGGG----------------CTGCC-AT---CGATTGCATCGACACCAAATTAAAAAACCA
         erecta  -GCCGCGGA------------------------GTGG--GGCCATCAACGCCTCGCTTATGGG----------------CTGCC-AT---CGATTGCATCGACACCGAATTAAAAAACCA
      ananassae  TACTATAGAG------------TGTAAT-CTCTGTGG--AGCTATCAACGCCGCGGTTATGGG----------------CTGCCAAT---CGATTGCATCGACACCAAATTAAAAAACCA
  pseudoobscura  AGCGGCAGAGGCACTCGCACTCTGCGATAATCTGACT--GGCTATCAACGCCTCGTTTATGGG----------------ATGCC-AT---CGATTGCATCCACACCAAATTAAAAAGCCA
     persimilis  AGCGGCAGAGGCACTC-CACTCTGCGATAATCTGACT--GGCTATCAACGCCTCGTTTATGGG----------------ATGCC-AT---CGATTGCATCCACACCAAATTAAAAAGCCA
        virilis  -AGCCGCTA------------------------ATCGCTGGCTATCAACGCCTTGTTGTTAGT-----------GGCTGTTTCT-ATAC--GATTTCATCGACACCAAATTAAAAAACCA
     mojavensis  -GCTACGTA------------------------ATCGCCGGCTATCAACGCCTTGTTGTTAGT-----------GGATCTTGTT-GGGC-TGTTTCCATCGACACCAAATTAAAAAACCA
      grimshawi  -TGCGAGTA------------------------ATCGTCGGCTATCAACGCCTTGTTGTTAGTTGTAGTCTATCGACTCTTTCT-ATATACGATTCCATCGACACCAAATTAAAAACCCA
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  TTGCCGACCATAAAAAAGCACTTAACTCGTCAATTAACAC-ACGAT----CTA------------AGAAG-AGCTGCAAG--GAAA-ATCTCCGC----TTGT-CAATGGAAAA------
       simulans  TTGCCGACCATAAAAAAGCACTTAACTCGTCAATTAACAC-ACGAT----CTA------------AGAAG-AGCTGCAAG--GAAA-ATCTCCGC----TTGT-CAATGGAAAA------
      sechellia  TTGCCGGCCATAAAAAAGCACTTAACTCGTCAATTAACAC-ACGAT----CTA------------AGAAG-AGCTGCAAG--GAAA-ATCTCCGC----TTGT-CAATGGAAAA------
         yakuba  TTGCCAGCCATAAAAAAGCACTTAACTCGTCAATTAACAC-ACGAT----CTA------------AGAAG-CGCTGCAAG--GAAA-ATCTCCGC----TTGT-CAATGGAAAA------
         erecta  TTGCCAGCCATAAAAAAGCACTTAACTCGTCAATTAACAC-TCGCT----CTA------------AGAAG-AGCTGCCAG--GGAA-ATCTCCGC----TTGT-CAATGG-AAA------
      ananassae  TTGCCAGCCATAAAAAAACACTTAACTCGTCAATTAACACAACCGT----CTA------------AGAGG--------AG--AAAA-CTCTTCCC----TCTT-TCTT------------
  pseudoobscura  TTTCCACTCATAAAAAAGCACTTAACTTGTCAATTAACAC-AGACT----CTA------------AGAAGAAACCAAAAG--AAAA-A-------------AA-AAATGGAAAATCGGAA
     persimilis  TTTCCACTCATAAAAAAGCACTTAACTTGTCAATTAACAC-AGACT----CTA------------AGAAGAAACCAAAAGAAAAAA-A-------------AA-AAATGGAAAATCGGGA
        virilis  TTTCGAGTCATAAAAAAGCACTTAACTTGTCAATTAACGC-ATCGGAGCAATA------------ACACC-AACACACAC--ACAC-ACGCACACACAGATAC-TGCTTGGAAA------
     mojavensis  TTTCGAGTCATAAAAAAGCACTTAACTTGTCAATTAACGC-ATCGCAGCAATA------------ACACC-AACACACAC--ACAC-ACACACAC----ATGC-TGCTTGGAAA------
      grimshawi  TTTCGAGTCATAAAAAAGCACTTAACTTGTCAATTAACGC-ATCGCAGTAATAACACACTCTCACACACC-AACACACAC--ACACAACACACAC----ATGCGTAAAGAGAAA------
        Summary  BBBBBBRRRRRRRRRRBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  --------------------------------------------------------C-------TCTTCTCCTTTCGAAGGGGCTT-CCCCCGCCATCAT------------------AT
       simulans  -------------------------------------------------------AC-------TCTTCTCCTTTCGAAGGGGCTT--CCCCGCCATCAC------------------AT
      sechellia  -------------------------------------------------------TC-------TCTTCTCCTTTCGAAGGGGCTT-CCCCCGCCATCAC------------------AT
         yakuba  -------------------------------------------------------AC-------TCTTCTCCTTTC---GGTGCTT-CCCCCGCC-------------------------
         erecta  -------------------------------------------------------AC-------GCTTCTCCTTTC---GGGGCTT-CCCCCGCC-------------------------
      ananassae  ----------------------------------------------------------------TCTTTTTTTTTC--AGATTCTT-CCCCCCAC-------------------------
  pseudoobscura  AAAGCGGAGATGGAGGGAGAGGGAGAGTAGAGTTTTCCTGCG-------------TC-------TCTCCCTCTTTTGTGTGTGTGTGCCCCCGTA-------------------------
     persimilis  AAAGCGGAGACG------GAGGGAGAGTAGAGTTTTCCTGCG-------------TC-------TCTCCCTCTTTTGTGTGTGTGTGCCCCCGTA-------------------------
        virilis  --------------------------AATGATTTTTCCTTTG--GCAGCTTCTAGTCTTGTGTGTCTGCTCTTTA-------------------------------------------CG
     mojavensis  --------------------------ATAGATTTTCC------------------TGTTGCGC-TCTGCTCTTTA---------------------------------------------
      grimshawi  --------------------------AATGATTTTTCCTTTTCCTCGACGGCT--TCTAGTCT-TCTGCTTTTCT-------------------------GTTTCTCTGATTTTAATGGG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  CTCCCCCGCACCTA--CTTTTCCCC--TGTCAATCGTCAGCGCGTTTTAGGGTCTCGGCTTCTGCGTGGC--GTGTGTGCGTGAGCG--------------GTGACCTTCGACC--TGAG
       simulans  CTCCCCCGCACCCG--CTTTTCCCC--TGTCAATCGTCAGCGCGTTTTAGGGTCGCTGCTTCTGCGTGGC--GTGTGTGCGTGAGCG--------------GTGACCTTCGACC--CGAG
      sechellia  CTCTCCCGCACCCG--ATTTTCCCC--TGTCAATCGTCAGCGCATTTTAGGGTCGCTGCTTCTGCGTGGC--GTGTGTGCGTGAGCG--------------GTGACCTTCGACC--CGAG
         yakuba  ----CCCGCCCCCG--CTATTCCCCCCTGTCAATCGTCAGCTCGTTTTAGGGTCGCTGCTTCTGCGTGGC--GTGTGTGCGTGACCGGGAACCGGTGACTTCTGACCTTCGACC--CGAG
         erecta  ----CCCGCACCCG--CCTATCCCC---ATCACTCGTCAGCGCGTTTTAGGGTCGCTGCTTCTGCGTGGCGTGTGTGTGCGTGTGTGCGTGTGCGTGCCCGGTGACCTTCGACC--CGAG
      ananassae  ----------------------TCT--CGTCAATCGTCAGCGGGTTTTAGG------GCTTCTGCTTGGC--GTGTGTGCGTGACTT-------GTGACCTTCGACCTTCGATC--CGAG
  pseudoobscura  ----CCCGTACCCGTCACCGTCCCC---GTCAATCGTCAGCACATTTTAGGTTCCCTGCGGCCCTGTGGC--GTGTGTGCCTGACTC--------------CTGACCTTCGAACTACGAT
     persimilis  ----CCCGTCACCGTACCCGTCCCC---GTCAATCGTCAGCACATTTTAGGTTCCCTGCGGCCCTGTGGC--GTGTGTGCGTGACTC--------------CTGACCTTCGAGCTACGAT
        virilis  CACGCTCGCAC-----------------GTCAATCGTCAGCGCGTTTTAGTG-----GCA------------------GCGAGAATC--------------GTGACCTGTGACCTTCGAC
     mojavensis  ----------------------------GTCAATCGTCAGCGCGTTTTAGTG-----GCAATCGAATATGAAGTCGATGCGTGAATC--------------GTGACCTCTGACCTTCGAC
      grimshawi  CACTCTCGCAA-----------------GTCAATCGTCAGCGCATTTGAGTGTC-TTGCACCAAAATCAGAAAT----TCGTGACCT--------------GTGACCTGTGACCTTCGAA
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBMMMMMMMMMMBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  GATC-TAACAGTT--------------------------------------CCGATAGACAAGCG-----------CTGGCTCTGCGCTACATGTTGTCACATAAAGTGTCG-CTCTTC-
       simulans  GATC-TAACAGTT--------------------------------------CCGATAGACAAGCG-----------CTGCCTATGCGCTACATGTTGTCACATAAAGTGTCG-CTCTTC-
      sechellia  GATG-TAACAGTT--------------------------------------CCGATAGACAAGCG-----------CTGCCTATGCGCTACATGTTGTCACATAAAGTGTCG-CTCTTC-
         yakuba  GATC-TAACAGCT--------------------------------------CTGATAGTCAAGCG-----------CTGCCTCTGCGCTACATGTTGTCACATAAAGTGTCG-CTCTTC-
         erecta  GATC-TAACAGTT--------------------------------------CCGATAGCCAAGCG-----------CTGCCGCTGCACTACATGTTGTCACATAAAGTGTCG-CTCTTC-
      ananassae  GATCAGAGCAGTTGGAACTCCCACTCC----------------CCTTGTCGGCGATAAGAAAACG-----------CTGCCTGTGCGCTACATGTTGTCACATAAAGTGTCG-CTCTTC-
  pseudoobscura  CTTC-TGGTAGTG--TACTCCCACTCCCACTCCTATTCCGCTTCCTTGTCGGCGATAAGCAAACG-----------CTGCC--TGCGCCCCATGTTGTCACATAAAGTGTCGCCTCTTC-
     persimilis  CTTC-TGGTAGTG--TACTCCCACTCCCACTCCTATTCCGCTTCCTTGTCGGCGATAAGCAAACG-----------CTGCC--TGCGCCCCATGTTGTCACATAAAGTGTCGCCTCTTC-
        virilis  TTCT-TGTCTGCG--------------------------------------GCGATAGGCAAACGAGCCGCAGCGTCCGCC--TGCGCTGCATGTTGTCACATAAAGTGTCA--GCTTC-
     mojavensis  TGGC-TGT---CG--------------------------------------GCGATAGCCAAACGAG---------TCGCC--TGCGCTACATGTTGTCACATAAAGTGTCA--GCTTCA
      grimshawi  C------------------------------------------------------------------------------------CGATACATGTTGTCACATAAAGTGTCA--GCAAC-
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBRRRRRRRRRRBBBBBBBBBBBB

                 
   melanogaster  AAAAGCAGCGCAG-----CA------------CTGCGTGAGGCC------CAAAATCGGA------------TTCGGATTCGGATACGAAATGGG------------AATGGGAATGGGC
       simulans  AAAAGCAGCGCAG-----CA------------CTGCGTGAGGCC------CAAAATCGGA------------TTCGGATTCGGATACGAAATGGG------------AATGGGAATGGGC
      sechellia  AAAAGCAGCGCTG-----CA------------CTGCGTGAGGCC------CAAAATCGGA------------TTCGGATTCGGATACGAAATGGG------------AATGGGAATGGGC
         yakuba  AAAAGGAGCGCAG-----CA------------CTGCGTGAGGCC------CAAAATCGTT------------TTCGGATTCGGATACGAAATGGGTATGGGAATGGGAATGGGAATAGGC
         erecta  AAAAGGAGCGCAG-----CG------------CTGCGTGCGGCC------CAAAG------------------TCGGATTCGGATTCGGAATGGG-------------------------
      ananassae  AAAAGGAGCGCAGCTCCTCA------------CTGCGTGAGGCC------CGGAATCGAA-------------TCGGA-TCGGATCGG--ATGGC--------------TGGGAATA---
  pseudoobscura  AAACGGAGCGCTG-----CA------------CTGCGTGCGGCC------CTGAATCGGA------------A------TCGGATTCGGATTCAG------------AGTCCAAGTCCAA
     persimilis  AAACGGAGCGCTG-----CA------------CTGCGTGCGGCC------CTGAATCGGA------------ATCGGATTCGGATTCGGATTCAG------------AGTCCAAGTCCAA
        virilis  AAAGGCACA--AG-----CA------------CTGCGTGCGGCC----------------------------------------------------------------------------
     mojavensis  AAAGGCAGC--AG-----CAGCAGCAGCCGCGCTGCGTGCGGCCCGACCCGGAAGGCTCAATAGGGCCAAAG-----------ACCCAAAGGCCG------------AC---------AA
      grimshawi  AGCAACAGC--AG-----CAGCAGCAGCAGCACTGCGTGCGGC-------CAAAAGCGGA-----------------------ATACAGAAGAAG------------AAAGCAAAAAGAA
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  ATGGTTATAGAAAT--------------------GGGAGTC-------------------AGATTCGGGCTCATTGCCATTGTCCGCGTGTCGCC-TAATTGTGGCAGTGTCCTTCGG--
       simulans  ATGGTTATAGAAAT--------------------GGGAGTC-------------------AGATTCGGGCTCATTGCCATTGTCCGCGTGTCGCC-TAATTGTGGCAGTGTCCTTCGG--
      sechellia  ATGGTTATAGAAAT--------------------GGGAGTC-------------------AGATTCGGGCTCATTGCCATTGTCCGCGTGTCGCC-TAATTGTGGCAGTGTCCTTCGG--
         yakuba  ATGGTTATTGAAAT--------------------GGGAGTC-------------------AGATTCGGGCTCATTGCCATTGTCCGCGTGTCGCC-TAATTGTGGCAGTGTCCTTCGG--
         erecta  ATGGTTATTGAAAT--------------------GGGAGTC-------------------AGACTCGGGCTCATTGCCATTGTCCGCGTGTCGCC-TAATTGTGGCAGTGTCCTTCGG--
      ananassae  -----TATTAGAAC--------------------AGTAGACTCCGACTCTGACCCCGAATGGAGTCAGTTTCATTGCCATTGTCCGCGTGTCTCC-TAATTGTTGCAGTGTCCTTCGG--
  pseudoobscura  GTCGATGTTGAAAT--------------------TGAAGTC-------------------------------ATTGTCATTGTCCGCGTGTCTCC-TAATTGTTGCAGTGTCCTTCGA--
     persimilis  GTCGATGTTGAAAT--------------------TGAAGTC-------------------------------ATTGTCATTGTCCGCGTGTCTCC-TAATTGTTGCAGTGTCCTTCGA--
        virilis  ----------------------------------AAAGTCG-------------------ACAACTGA--------CAATTGAGCCCCGGACATT-TAATTGTCCCAGTGTCCTTCGG--
     mojavensis  TCGCCGATCGAGAATTGACAATTGAGAATCGACAAGAATTG-------------------AGAAATGA--------GAATCGAGCCCCGAACACC-TAATTGTTGCAGTGTCCTTCGGT-
      grimshawi  TACTCTGCCGACAATTGACAATTG----------ACAATTT-------------------AGAATTGAGC--CTTTGGATTGGGTCTCGGACACCGTAATTGTTGCACTGTCCTTCGGCA
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBM

                 
   melanogaster  ATTTATGACACAAAACAGAGC------TG----------CTTGAAAGG-CTGCCGCC-AACATAACGCTCCCCAAGGGTGGTCCCCATGTAACCATATACCATTTACCATTT--------
       simulans  ATTTATGACACAAAACAGAGC------TG----------CATGAAAGG-CTGCCGCC-AACATAACGCTCCCCAAGGGTGGTCCCCATGTAACCATATACCATTTACCATTT--------
      sechellia  ATTTATGACACAAAACAGAGC------TG----------CTTGAAAGA-CTGCCGCC-AACATAACGCTCCCCAAGGGTGGTCCCCATGTAACCATATACCATTTACCATTT--------
         yakuba  ATTTATGACACAAAACAGAGC------TG----------CTTGAAAGG-CTGCCGCC-ACCATAACGCTCCCCAAGGGTGGTCCCCATGTAACCATATACCATATACCATTT-TTGTGTA
         erecta  CTTTGTGACACAAAACAGAGC------TG----------CTTGAAAGG-CTGCCGCC-ACCATAACGCTCCCCAAGGGTGGTCCCCATGTAACCATATACCATATACCATGTACCATGTA
      ananassae  ATTTATGACACAAAACAGAGC------CA----------TTTCAAAGGCCTGCCGCC-GCTATTACGCTCCCCCAGGGTGGTCTT----------GAAACTTTCTTCCACTT--------
  pseudoobscura  ATTTATGACCCAAAACAATGC------TG----------GATAAAAGA-CTGC------------CGCTCCTTGGGGGTGGTCTCCGCGTAACGTGATCCCGTTCTTATGTG--------
     persimilis  ATTTATGACCCAAAACAATGC------TG----------GATAAAAGA-CTGC------------CGCTCCTT-GGGGTGGTCTCCGCGTAACGTGATCCCGTTCTTATGTG--------
        virilis  CTTTATGACAGACAACAAGGCAACATCCACAAACACG-GCTTGAAAGG-CTGCCGCTGCTCACAGCGTTG----GGGGTGGTCCC-----------------------------------
     mojavensis  TTTTATGACAGTCAACAAGACA-----CA-AAACACGTTCATGAAAGG-CTGCCGCTGCTCACAGCGTTG----GAGGTGGTCC------------------------------------
      grimshawi  TTTTATGACACACAACAAACCGA----TG-AGGCAAGCATATGAAAGG-CTGCCGCT------AGCATTG----GGGGTGGTCCCCAAACAACAA-ATATCATTGGCGAGTC--------
        Summary  MMMMMMMMMBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  ------------TCACATC---------TTTTTTTTTTTAACGAACC-TTTGGGACTTCCTTGTTTTGACAACACTGAAGATGGTGCCCGACGAACCCTCTTT-----CTGACCCACTTA
       simulans  ------------TCACATC----------GTTTTTTTTTACCGAACCTTTTGGGACTTCCTTGTTTTGACAACGCTGAAGATGGTGCCCGACGAAGCCTCATT-----CTGACCCACTTA
      sechellia  ------------TCACATC----------GTTTTTTTATACCGAACC-TTTGGGACTTCCTTGTATTGACAACGCTGAAGATGGTGCCCGACGAAGCCTCATT-----CTGACCCACTTA
         yakuba  ----GTACTATATCACATT-----------GTTTTTTATGCCGAACC-TTTGGGAGTTCCTTGTTTTGACCA-------------GCCCTACAAACCCGCCTT-----GTGACCCACTTA
         erecta  CCATATACCATTTTTCATTTTCCATTTGCCATTTTTTATGCCGAACC-TTTGGCAGTTCCTTGTTTC------------------------------------------TGACCCACTGA
      ananassae  ------------TTTCCTT-----------------------AAATA----------------------------------------------------------------------TTA
  pseudoobscura  ------------TCGCATA-----------------------GAATC---TAGTATTCCTTTGTG--------------------GACTGCGGAACCATCTTTAGGCAGTTCCCCCTCTT
     persimilis  ------------TCGCATA-----------------------GAATC---TAGTATTCCTTTGTG--------------------GACTGCGGAACCATCTTTAGGCAGTTCCCCCTCTT
        virilis  ------------------------------------------------------------------------------------------------------------------------
     mojavensis  ------------------------------------------------------------------------------------------------------------------------
      grimshawi  ------------TTGT--------------------------------------------------------------------------------------------------------
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  AACGCTAGGTAATCGCATAG-----ATACTAACCTGAGCTGGGACGATCGCTGTAGCGGGTGCAGTACACCCAGGCGGGCCACATCTCGTTCTTGCCGCCCTCTGTGGTGGTGGATCCCG
       simulans  AACGCTAGGTAATCGCATAG-----ATACTAACCTGAGCTGGGACGATCGCTGTATCGGGTGCAGTACACCCAGGCGGGCCACATTTCGTTCTTGCCGCCCTCTGTGGTGGTGGATCCCG
      sechellia  CACGCTAGGTAATGGCATAG-----ATACTAACCTGAGCTGGGACGATCGCTGTAGCGGGTGCAGTACACCCAGGCGGGCCACATTTCATTCTTGCCGCCCTCTGTGGTGGTGGATCCCG
         yakuba  AACCCTAGGTAATCTCAAAG-----ATACTAACCTGAGCTGGGACGATCGCTGTAGCGGGTGCAGTACACCCAGGCGGGCCACATCTCATTCTTGCCGCCCTCTGTGGTGGTGGATCCCG
         erecta  AACCCT-GGTAATCTCAAAG-----ATACTAACCTGAGCTGGGACGGTCGCTGTAGCGGGTGCAGTACACCCAGGCGGGCCACATCTCGTTCTTGCCGCCCTCGGTGGTGGTGGATCCCG
      ananassae  AAAAAAAGATGA--AAATAA-----ATACTAACCTGAGCTGGGACGATCGCTGTAGCGGGTGCAGTAGACCCAGGCGGGCCACATCTCGTTCTTGCCACCTTCGGTGGTTGTGGATCCCG
  pseudoobscura  CACACTTTATAG--ATATAG-----CTACTAACCTGAGCTGGGACGATCGCTGTAGCGGGTGCAGTAGACCCAGGCGGGCCACATCTCGTTCTTGCCGCCTTCGGTGGTCGTGGAGCCCG
     persimilis  CACACTTTATTG--ATATAT-----CTACTAACCTGAGCTGGGACGATCGCTGTAGCGGGTGCAGTAGACCCAGGCGGGCCACATCTCGTTCTTGCCGCCTTCGGTGGTCGTGGAGCCCG
        virilis  -------------------------ATACACACCTGAGCTGGGACGGTCGCTGTACCGGGTGCAGTACACCCACGCGGGCCACATCTCGTTCTTGCCGCCGTCGGTGGTGGTGGAGCCTG
     mojavensis  ---------TAACCATATAGAAAGAATACACACCTGAGCTGGGACGATCGCTGTAGCGCGTGCAGTAGACCCACGCGGGCCACATCTCATTTTTGCCGCCGTCGGTGGTGGTGGAGCCCG
      grimshawi  -----------------------ATATACACACCTGAGCTGGGACGATCGCTGTAGCGGGTGCAGTAGACCCACGCTGGCCACATCTCGTTCTTGCCGCCGTCGGTGGTTGTGGAGCCCG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  TCTCGGAACGCGTGTCATCCGAGGACTCCATTCCGGAATCTCGGCTAACGGCGGATGGCGGCGGGATTGGCTGCGGCTGGGGACTGCTGGCA------------TTGACTCCGGATCCAC
       simulans  TCTCGGAACGCGTGTCATCCGAGGACTCCATGCCGGAATCTCGGCTAACGGCGGATGGCGGCGGGATTGGCTGCGGCTGGGGACTGCTGGCA------------TTGACTCCGGATCCAC
      sechellia  TCTCGGAACGCGTGTCATCCGAGGACTCCATGCCGGAATCTCGGCTAACGGCGGATGGCGGCGGGATTGGCTGCGGCTGGGGACTGCTGGCA------------TTGACTCCGGATCCAC
         yakuba  TCTCGGAACGCGTGTCATCCGAGGACTCCATGCCGGAATCCCGGCTAACGGCGGATGGCGGAGGAATTGGCTGCGGCTGGGGACTGCTGGCA------------TTGACTCCGGATCCAC
         erecta  TCTCGGAACGCGTATCATCGGAGGACTCCATGCCGGAGTCCCGGCTAACGGCGGATGGCGGAGGAATGGGCTGCGGCTGGGGACTGCTGGCA------------CTGACGCCGGAGCCAC
      ananassae  TCTCCGAGCGTGTATCATCCGAGGACTCCATACCAGAGTCCCGACTAACGGCGGAGGGCGGTGGAATCGGCTGGGGCTGTGGACTGCTGGCA------------TTGGCCACAGCGGAGG
  pseudoobscura  TCTCGGAGCGGGTGTCGTCCGAGGACTCCATGCCAGAGTCGCGGCTCACGGCAGAGGGTGGTGGAATCGGCTGGGGCTGGGGACTGCTGGCG------------TTGGCCGCTG---CAC
     persimilis  TCTCGGAGCGGGTGTCGTCCGAGGACTCCATGCCAGAGTCGCGGCTCACGGCAGAGGGTGGTGGAATCGGCTGGGGCTGGGGACTGCTGGCG------------TTGGCCGCTG---CAC
        virilis  TCTCGGAGCGGGTGTCGTCCGAGGACTCCATGCCGGAGTCGCGGCTGACAGCGGAGGGTGGCGGTATGGGCTGC------GGGCTGCTGGCATTG---------TTGGCTCCG-------
     mojavensis  TCTCGGAGCGCGTGTCGTCCGAGGACTCCATGCCGGAGTCACGGCTAACGGCCGATGGAGGGGGTATGGGCTGC------GGGCTGCTGGCATTGTTGGCATTATTGGCTCCG-------
      grimshawi  TCTCGGAGCGGGTGTCATCCGAGGATTCCATGCCCGAGTCTCGACTAACCGCCGAGGGTGGTGGAATGGGCTGG------GGACTGTTAGCGGCA---------TTGGCGCCACCTCCAT
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  TGGCT------------------CCCAGTCGGCTACTGGGCGAGGAGTTCAAGGAACTGGCCGCCGAGGAGCA---------------ACCCGACGA---GGAGGAGCTCGAGCTGGTGG
       simulans  TGGCT------------------CCCAGTCGGCTACTGGGCGAGGAGTTCAAAGAGCTGGCCGCCGAGGAGCA---------------ACCCGACGA---GGAGGAGCTCGAGCTGGTGG
      sechellia  TGGCT------------------CCCAGTCGGCTACTGGGCGAGGAGTTCAAGGAGCTGGTCGCCGAGGAGCA---------------ACCCGACGA---GGAGGAGCTCGAGCTGGTGG
         yakuba  TGGCT------------------CCCAGGCGGCTGCTGGGCGATGAGTTCAAGGAGCTAGCCGCCGAGGAGCA---------------ACCCGACGA---GGAGGAGCTCGAGCTGGTGG
         erecta  TGGCT------------------CCCAGGCGGCTGCTGGGCGAGGAGTTCAAGGAGCTGGCCGCCGAGGAGCA---------------ACCCGACGA---GGCGGAGCTCGAGCTGGTGG
      ananassae  TGGCTCCCATTCCCACTCCCACACCCAGGCGACTGCTGGGCGAGGAGTTGAGCGAACTGGAGGCCGAGGAGCA---------------GCCGGAGGA---TGAGGAACTTGAACTGGTAG
  pseudoobscura  TGCCT------------------CCCAGGCGACTGCTGGGCGAGGAGTTCAGCGAACTGGGGGCCGAGGAGCA---------------GCCCGAGGAGCTGGAGGATGAGGAGCTGGTGG
     persimilis  TGCCT------------------CCCAGGCGACTGCTGGGCGAGGAGTTCAGCGAGCTGGGGGCCGAGGAGCA---------------GCCCGAGGAGCTGGAGGATGAGGAGCTGGTGG
        virilis  -----------------------GCCAGGCGACTGCTGGGCGACGAGTTCAGCGAGCTTGCCGCCGAGGAGCA---------------GCCGGAGGAGGAGGAGGCGCTGCAGCTGGCTG
     mojavensis  -----------------------GTCAGGCGGCTGCTGGGCGAGGAGTTGAGCGAGCTGGCGGAGGAGGAGCA---------------GGCGCTGCTGCTGCTGCTGTTGCTGCTGGCCG
      grimshawi  T---T------------------GCCAAACGACTGCTGGGCGAGGAGTTCAGCGAGCTGGTCGACGAGGAGCAGCCCGATGAGGAGGCGCCACTGCTGCTGCTGCTGCTGCTGCTGGCTG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  CCACGGAAGA---------GGTGCTGCTAATGGTCGAGGCATTGGAGGCGGGTGGCGGACTGGCCAAGCTGCTGGC------ACTG---C-------------TAC--------TCAGCG
       simulans  CCACGGAGGA---------GGTGCTGCTGATGGTGGAGGCATTGGAGGCGGGAGGCGGACTGGCCAAGCTGCTGGC------ACTG---C-------------TGC--------TCAGCG
      sechellia  CCACGGAGGA---------GGTGCTGCTGATGGTGGAGGCATTGGAGGCGGGTGGCGGACTGGCCAAGCTGCTGGC------ACTG---C-------------TGC--------TCAGCG
         yakuba  CCACGGAGGA---------GGTGCTGCTGATGGTGGAGGCATTGGAGGCGGGTGGCGGACTGGCCAAGCTGCTGGC------ACTG---C-------------TGC--------TTAGCG
         erecta  CCACGGAGGA---------GGTGCTGCTGATGGTGGAGGCATTGGAGGCGGGCGGCGGACTGGCCAGGCTGCTGGC------ACTG---C-------------TGC--------TCAGCG
      ananassae  CTGTGGAGGAA------CTGGAACTGCTGATGGTGGAGGCGTTGGAGGCGGGCGGCGGGCTGGCCAGGCTGCTGGC------ACTG-------------------C--------TCAACG
  pseudoobscura  CCGTCGAGGT---------GGA---GCTGATGGTGGAGGCATTCGAGGCGGGCGGTGGACTGGCCAGGTTGTTGGCCAGGCTGCTGGAGC-------------TGC--------TCAGCT
     persimilis  CCGTCGAGGT---------GGA---GCTGATAGTGGAGGCATTCGAGGCGGGCGGTGGACTGGCCAGGTTGTTGGCCAGGCTGCTGGAGC-------------TGC--------TCAGCT
        virilis  CTGTGGAGGA---------ACTGCTGCTGATGGTGGATGCATTCGAGGCGGGCGGAGGACTGGCCAGCTGGCTGGC------GCTG---C-------------TGC--------TTGGCG
     mojavensis  CTGTGGAGGAG------CTGCTGCTGCTGATGGTGGATGCATTGGAGGCGGGTGGCGGACTGGCCAGCTGGCTGGC------GCTG---CTGCTACT-GCTGTTGC--------TCGGCG
      grimshawi  CTGCGGAGGAGGAACTACTGCTGCTGCTGATGGTGGAGGCATTCGAGGCGGGCGGTGGACTGGCCAAATGACAGGC------GCTG---CTGCTGCTCGAGGATGCGGCACCAACTGGTG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  GAGGTTG---GGTCATCGTAGGGGCAGCAGGTTGTCCGATCTGCGAGACCGCCTTGCACAGGGATCCCAGAGCAGATTTCTCTGGATTGGCATCGCTCATCTTGGAGCTCATGGGCGGCG
       simulans  GAGGTTG---GGTCATCGTTGGGGCAGCAGGTTGTCCGATCTGCGAGACCGCCTTGCACAGTGATCCCAGAGCGGATTTCTCGGGATTGGCATCGCTCATCTTGGAGCTCATGGGCGGCG
      sechellia  GAGGTTG---GGTCATCGTCGGGGCAGCAGGTTGTCCGATCTGCGAGACCGCCTTGCACAGGGATCCCAGAGCGGATTTCTCGGGATTGGCATCGCTCATCTTGGAGCTCATGGGCGGCG
         yakuba  GCGGTTG---GGTCATCGTGGGGGCAGAAGGTTGTCCGATCTGCGAGACCGCCTTGCACAGGGATCCCAGAGCGGATTTCTCGGGATTGGCATCGCTCATCTTGGAGCTCATGGGCGGCG
         erecta  GCGGTTG---GGTCATGGTGGGGGCAGAAGGTTGTCCGATCTGCGAGACCGCCTTGCACAGGGATCCCAGAGCGGATTTCTCGGGATTGGCATCGCTCATCTTGGAGCTCATGGGCGGCG
      ananassae  GTGGCTG---GGTCATCGTGGGAACGGCCGGCTGACCGATCTGGGAGACCGCCTTGCACAGGCTGCCCAGAGCCGACTTCTCCGGGTTGGGCTCGCTCATCTTGG------TCGGCGGCG
  pseudoobscura  GCGGGGG---CAAGGTCGTGGTCGTTGTGGGCTGGCCGATTTGGGAGACGGTCTTGCAGAGCGAGCCCAGGGCGGACTTTTCAGCGCAGGACTCGCTCATCTTGGAG------GCCGGAG
     persimilis  GCGGGGG---CAAGGTCGTGGTCGTTGTGGGCTGGCCGATTTGGGAGACGGTCTTGCAGAGCGAGCCCAGGGCGGACTTTTCAGCGCAGGACTCGCTCATCTTGGAG------GCCGGAG
        virilis  TCGTCAC---GGGCGTCGTCGACTGCGC---TTGGCCAATTTGCGAGACCGTCTTGCACAACGAGCCCAGGGCCGACTTCTCCACGCTGGGCTCCGTCAGCTT------CGCCGTCGGCG
     mojavensis  TTGTTGCCGGGGGCAGCGTCGACTGTGC---TTGGCCAATCTGGGAGACGGTCTTGCACAGTGATCCCAGAGCGGACTTCTCCATGCTGGACTCCGTCAGCTT------AGCCGTCGGCG
      grimshawi  TCGTCAT---CGCCGTCGTCGTCGTTGA---CTGGCCGATCTGGGAGACCGTCTTGCACAACGAGCCCAACGCGGACTTCTCCATGCCACCCGACTCCAGCTT------GGCCGTCGGCG
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  GGATGACGGCATT------------GGCTGCACTCCTGCGCAGCCGACTCTGCACGATTTCCTCGTGTATCCTGGGATAGGCAGCCGGATTGAAGCAGTTAAGGAAGTTGGCCCGTTCCA
       simulans  GGATTACGGCATT------------GGCTGCACTCCTGCGCAGGCGACTCTGCACGATTTCCTCGTGTATCCTGGGATAAGCAGCCGGATTGAAGCAGTTAAGGAAGTTGGCCCGTTCCA
      sechellia  GGATGACGGCATT------------GGCTGCACTCCTGCGCAGGCGACTCTGCACGATTTCCTCGTGTATCCTGGGATAAGCAGCCGGATTGAAGCAGTTAAGGAAGTTGGCCCGTTCCA
         yakuba  GGATGACGGCATT------------GGCAGCACTCCTGCGCAGGCGACTCTGCACGATCTCCTCGTGTATCCTGGGATAGGCAGCCGGATTGAAGCAGTTGAGGAAGTTGGCCCGCTCCA
         erecta  GGATGACGGCGTT------------GGCTGCACTCCTGCGCAGGCGACTCTGCACGATTTCCTCGTGTATCCGGGGATAGGCAGCCGGATTGAAGCAGTTGAGGAAGTTGGCCCGCTCCA
      ananassae  GAATCACCGCATT------------GGCGGCACTCCGGCGCAGGCGGCTCTGGACGAGCTCCTCGTGTATCCTGGGATAGGCCACCGGATTGAAGCAGTTGAGGAAGTTGGCCCGCTCAA
  pseudoobscura  GGATCACCGTGTT------------GGCGGCGCTCCGGCGCAGACGGCTCTGGACAATCTCCTCGTGGATGCGCGGGTAGGCGGCCGGGTTGAAGCAATTGAGGAAGTTAGCCCGCTCGA
     persimilis  GGATCACCGTGTT------------GGCGGCGCTCCGGCGCAGACGGCTCTGGACAATCTCCTCGTGGATGCGCGGGTAGGCGGCCGGGTTGAAGCAATTGAGGAAGTTAGCCCGCTCGA
        virilis  GCAGCACAGCATTCGG---ATTGCCAGCGGCGCTGCGCCGCAGCCGACTTTGGACAAGCTCCTCATGGATGCGCGGATACGCGGCCGGGTTAAAGCAGTTCAGCAGATTGGCGCGCTCCA
     mojavensis  GCAGCACAGCATTCGG---ATTGCCAGCGGCGCTGCGGCGTAGCCGGCTCTGCACGAGCTCCTCGTGGATGCGTGGATAGGCAGCCGGATTGAAGCAGTTGAGCAGATTGGCTCGCTCCA
      grimshawi  GCAACACTGCATTGGGATTATTGTTGGCGGCACTCCGTCGCAGGCGACTCTGGACGAGCTCCTCGTGGATGCGCGGATAGGCGGCGGGATTGAAGCAGTTGAGCAGATTGGCTCGCTCCA
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  GCATCATGGCCGCAGTAGCGGCTGCGGCGGCAGCCTGCTGTTGCCG---GCTAAACTCCAGCAGATCCACTCTTGTAAAGGCGGAGGGCGTGGCAGTCTGGGAACGACT---CGCCTCGA
       simulans  GCATCATGGCCGCAGTAGCGGCTGCGGCGGCAGCCTGCTGTTGCCG---GCTAAACTCGAGCAGATCCACTCTTGTGAAGGCGGAGGGCGTGGCAGTCTGGGAACGATT---CGCCTCGA
      sechellia  GCATCATGGCCGCAGTAGCGGCTGCGGCAGCAGCCTGCTGTTGCCG---GCTGAACTCCAGCAGATCCACTCTTGTGAAGGCGGAGGGCGTGGCAGTCTGGGAGCGATT---CGCCTCGA
         yakuba  GCATCATGGCCGCGGTGGCGGCTGCGGCGGCGGCCTGCTGCTGCCG---GCTGAACTCCAGCAGATCCACTCTCGTGAAGGCGGAGGGCGTGGCTGTCTGGGAGCGATT---CGCCTCGA
         erecta  GCATCATGGCCGCAGTGGCGGCTGCGGCGGCCGCCTGCTGTTGCCG---GCTGAACTCCAGCAGATCCACTCTCGTGAAGGCGGAGGGCGTGGCTGTCTGGGAGCGATT---CGCCTCGA
      ananassae  TCATCATGGCCGCAGTGGCGGCTGCGGCGGCGGCCTGCTGCTGGCG---ACTAAACTCCAGGAGATCCACCCGCGTAAAGGCGGAGGGTGTGGCCGCCTGGGAGCGGTTGGCCGCCTCGA
  pseudoobscura  TCATCATGGCGGCGGTGGCTGCGGCAGCCGCCGCCTGCTGCTGCCT---ACTGAACTCCAGAAGATCCACCCGCGTGAAGGCGGAGGGCGTGGCAGCGGCTGCTCGGCT---GGCCTCGA
     persimilis  TCATCATGGCGGCGGTGGCTGCGGCAGCCGCCGCCTGCTGCTGCCT---ACTGAACTCCAGAAGATCCACCCGCGTGAAGGCGGAGGGCGTGGCAGCGGCTGCTCGGCT---GGCCTCGA
        virilis  GCATCATCGCAGCGGTGGCAGCTGCGGCAGCTGCCTGCTGCTGCCG---GCTAAACTCCAGCAGATCGACGCGAGTGAACGCGGAGGGCGTGGCTGCAGCAGCGCGACT---CGCCTCGA
     mojavensis  GCATCATTGCAGCGGTGGCTGCGGCGGCCGCCGCCTGCTGCTGCCG---GCTAAACTCTAGCAGATCCACACGCGTAAAGGCGGAGGGCGTGGCAGCGGCGGCTCGATT---CGCCTCGA
      grimshawi  GCATCATGGCTGCTGTGGCCGCTGCGGCGGCTGCCTGCTGCTGCTGCCTGCTGAACTCCAGCAGATCCACACGCGTGAAGGCGGAGGGCGTGGCAGCTGCAGCGCGACT---CGCCTCAA
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  AGGGGCGGAATATGCTG---GCC----------TGGT-----------------------------------------TCTCCATCGA----CTTG-----CCCGGCTTCTGGA------
       simulans  AGGGGCGGAAGATGCTG---GCC----------TGAT-----------------------------------------TCTCCATGGA----CTTG-----CCCGGCTTCTGGA------
      sechellia  AGGGGCGGAAGATGCTG---GCC----------TGGT-----------------------------------------TCTCCATGGA----CTTG-----CCCGGCTTCTGGA------
         yakuba  AGGGGCGGAAGATGCTG---GCC----------TGGT-----------------------------------------TCTCCATTGA----CTTG-----CCCGGCTTCTGGA------
         erecta  AGGGGCGGAAGATGCTG---GCC----------TGGT-----------------------------------------TCTCCAGCGA----CTTG-----CCCGGCTTCTGGA------
      ananassae  AGGGCCGGAAGATGCTG---GCC----------TGGT-----------------------------------------TGTCGGGCTG----CTTG-----CCCTGCTTCTGGG------
  pseudoobscura  AGGGGCGGAAAATGCTG---GCC----------TGGG-----------------------------------------ACTCCAGCGAGGCGTTTGGGGATCCTGGCTTCTTTAGTGTCT
     persimilis  AGGGGCGGAAAATGCTG---GCC----------TGGG-----------------------------------------ACTCCAGCGAGGCGTTTGGGGATCCTGGCTTCTTTAGTGTCT
        virilis  ACGGGCGAAAGATGCTG---GCCGCAGCAGCGGCAGC------------------------------GGAGACGGAAACGCCAGTGGA----GTCG-----CCTTGTTTGGTCT------
     mojavensis  AGGGGCGAAAGATGCTG---GCCGCAGCCGCAGCCGC------------------------------TGAGACGG---CGCTCGATGG----TTCG-----CCCTGCTTGGTCT------
      grimshawi  AGGGGCGAAAGATGAAGGATGCCGCTGCTGCGGCAGCCGCCGCCGACGAGGAGGAGGATGTGGAGGATGAGGTAGAGGAGGAAGTGGA----TTCG-----CCTTGCTTGCATT------
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

                 
   melanogaster  ---------------CATCTCCGAAACGATCGCTCAGGATGTTGGAGATGGAAAAGGCCAGCGAGGGCTTGGC---CGTCGACTGCTGCT
       simulans  ---------------CATCTCCAAAACGATCGCTCAGGATGTTGGAGATGGAAAAGGCCAGCGATGGTTTGGC---CGTCGACTGCTGCT
      sechellia  ---------------CATCTCCAAAACGATCGCTCAGGATGTTGGAGATGGAAAAGGCCAGCGATGGTTTGGC---CGTCGACTGCTGCT
         yakuba  ---------------CATCGCCGAAACGATCGCTCAGGATGTTGGAAATGGAAAAGGCCAGCGAGGGCTTGGC---CGTCGACTGCTGCT
         erecta  ---------------CATCGCCGAAGCGATCGCTCAGGATGTTGGAGATGGAAAAGGCCAGCGAGGGCTTGGC---CGTCGACTGCTGCT
      ananassae  ---------------CGTCGCCGAAGCGATCCGAGAGGATGTTGGAAATGGAGAAGGCCAGCGAGGGCTTGGC---CGTCGACTGTTGCT
  pseudoobscura  GCTGCTTGGGTGCTGCGTCTCCGAAGCGGTCGCTGAGGATGTTCGAGATGGAGAAGGCCAGCGAGGGCTTGGC---CGTGGAC---TGCT
     persimilis  GCTGCTTGGGTGCTGCGTCTCCGAAGCGGTCGCTGAGGATGTTCGAGATGGAGAAGGCCAGCGAGGGCTTGGC---CGTGGAC---TGCT
        virilis  ---GTTTGGCGG---CATCGCCGAAGCGGTCGCTGAGGATGTTGGAGATGGAGAAGGCCAGCGAGGGCTTCGACTGCTTGGAC---TGCT
     mojavensis  ---GCTTGGCCG---CATCCCCGAATCGATCGCTGAGTATGTTTGAGATGGAGAAAGCCAGCGATGGTTTCGATTGCTTGGAC---TGCT
      grimshawi  ---GCTTGGCAG---CATCGCCAAATCGATCGCTGAGTATGTTGGAAATGGAGAAGGCCAGCGATGGCTTCGATTGTTTCGAC---TGCT
        Summary  BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB


cau